Pre-Run Check Messages And Plate Alerts During A Run; Pre-Run Checks When A Plate Run Starts Or A Re-Injection Or A Cancelled Injection Is Added To The Run Queue; Pre-Run Checks Before Each Injection Or When A Paused Run Is Resumed - Thermo Scientific appliedbiosystems SeqStudio Flex Series User Manual

Chapter 6 Start and monitor a run
6

Pre-run check messages and plate alerts during a run

Pre-run check messages and plate alerts during a run

Pre-run checks are performed at the following times during a run:
• When a plate run starts
• When a re-injection is added to the Run queue
• Before each injection
• When a paused run is resumed
• When a cancelled injection is added back to the Run queue
A partial list of pre-run checks is shown below.
• Checks for valid spatial and spectral calibrations.
• Checks for a passing install run.
• Checks consumables expiration, volume, and number of remaining injections.
• Determines if adequate storage space is available for results.
• Determines if the plate has been installed in the drawer for more than 24 hours.
• Checks that the save locations specified in the plate file are available and writable.
• If you run using the automated barcode workflow, performs additional checks. See "Run plates
with the automated barcode workflow"
Pre-run checks when a plate run starts or a re-injection or a cancelled
injection is added to the Run queue
Pre-run checks are performed when a plate run starts or when a re-injection or a cancelled injection
is added to the Run queue. If these pre-run checks do not pass, a message screen is displayed. Two
message types are possible:
• Pre-run check failure message—The error condition must be corrected before the run can start.
• Pre-run check warning message—For information only, tap OK to start the run.
Examples of pre-run check failure messages include
array", "Plate type of the installed plate does not match the plate
Examples of pre-run check warning messages include
exceeded 24 hours on

Pre-run checks before each injection or when a paused run is resumed

Pre-run checks are also performed before each injection or when a paused run is resumed. If these
pre-run checks do not pass, a
To display the reason for the alert, tap the
displayed. For more information, see the following sections:
• "View alert and notification details"
• "Plate alert troubleshooting"
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on page
instrument", "Network drive save location is not
(Plate alert) symbol is displayed at the top of a plate position.
!
(Plate alert) symbol. The Notifications screen is
!
on page 149
on page 507
SeqStudio ™ Flex Series Genetic Analyzer with Instrument Software v1.0 User Guide
147.
"No spatial calibration available for capillary
file".
"Injections on plate will exceed or have
writable".