Thermo Scientific appliedbiosystems SeqStudio Flex Series User Manual page 565

file location 282
library 278
select in plate file 89
settings 282
file name format, with file name convention 278
file name maximum length 282
fill capillary array, maintenance wizard 409
filter library lists 257
firmware version 452
flags, quality 172
fragment analysis
See also install run
dye sets 530
electropherogram 179
install run 328
reagents, catalog numbers 541
results, instrument 180
results, Remote Monitoring software 192
run module, size ranges and run times 526
troubleshooting 490, 512, 513, 519
See also install run
FSA file, export 171, 469
G
GS600 LIZ v2.0 size standard, catalog numbers 541
GS600(60-600)LIZ+Normalization 275
GS600(80-400)LIZ+Normalization 275
GS600LIZ+Normalization 275
H
Help, Smart Help 473
Hi-Di formamide
≤8 freeze/thaw cycles validated 28
catalog numbers and storage 28
home screen
parts of 36–38, 40
view data for a run 153
I
import
library items 256
plate file, CSV or PSM file 264
Inbox
description 41
requirements and limitations 41
injection
cancel, instrument 165
cancel, Remote Monitoring software 192
cancel, Remote Monitoring software, cancel
command not sent to instrument 192
export 482
SeqStudio ™ Flex Series Genetic Analyzer with Instrument Software v1.0 User Guide
order, default 75
replicate, instrument plate file 92
replicate, Plate Manager 128
injection group, definition 89
injection list
change order 46, 163
view 46
injection properties, change during a run 165
injection protocol
create 283
defined 283
library 283
select in plate file 89
settings 284
Install Capillary Array maintenance wizard 371
install run
estimated run time 330
history 352
log files, fragment analysis 351
log files, sequencing 346
MicroSEQ ID 331
overview 329
pass fail criteria, fragment analysis 350
pass fail criteria, sequencing 340
perform 333
plate, prepare 315, 332
results, fragment analysis 347
results, sequencing 334
sequence and fragment in same run 329
sequencing, quality alerts 494
signing 246
standards, prepare 331
troubleshooting 494, 498
view spectral calibration 346
when to perform 329
instrument
circuit breaker 22, 537
clean 361
connect to network (software) 443
connect to Plate Manager cloud 114
connect to Plate Manager desktop 103
connect to wired or wireless network (hardware)
439–441, 535
direct connection to computer (hardware) 441
disconnect cloud profile from Thermo Fisher
Connect 224
disconnect from InstrumentConnect 229
interior components 21, 487
IP address 452
load plate 136
move and level 381
network connection 22, 537
pause, home screen 157
pause, Remote Monitoring software 193
Index
565