Thermo Scientific appliedbiosystems SeqStudio Flex Series User Manual page 568

Index
oven temperature
in run module 273
preheat, with detection cell 68
owner, plate 265
P
part numbers. See catalog numbers
password security 52, 99, 111, 238
pause, run 157
pause instrument
home screen 157
Remote Monitoring software 193
Run Queue 166
PDP. See pump
Peak Amplitude Thresholds 295
Peak Scanner software, results, download 207
Peak Window Size 295
PIN
change 225
change for profile 451
planned maintenance schedule 358
plasmid template sequencing, analysis settings 289
plate
384-well assembly 77, 80
8-tube strip assembly 79
96-well assembly 78
assembly 77
base, standard 77
catalog numbers 539
check alignment and seating of septa 82
layout 75
load into instrument 136
retainer required for SeqStudio Flex Series in‐
struments 77
run 140
sample plate, prepare 76
troubleshooting. See run troubleshooting
unload from instrument 139
plate barcode. See barcode
plate file
See also plate file, Plate Manager
change after linking 140
change the linked plate file before a run 144
copy on instrument 85
create 259
create CSV in Excel 129
create on instrument 84
create with default settings 83
defined 258
download example from Plate Manager 127
export or delete 264
import from CSV or PSM file 264
import on instrument 87
568
injection protocol, run module, dye set, size
library 258
link and run 140
print plate layout in Plate Manager 125
properties 265
sample names, custom fields, sample type, am‐
signing 246
troubleshooting 501
unlink from plate position 144
plate file, Plate Manager
assign wells 116
create a plate file 115
plate properties 116
PSM and CSV format 86, 98, 110
send to Inbox on instrument from Plate Manager
plate loading 136
Plate Manager
cloud, access 111
cloud, connect to instrument 114
cloud, parts of home screen 106, 112
desktop, access 99
desktop, connect to instrument 103
desktop, parts of home screen 96, 101
keyboard shortcuts 121
print plate layout 125
PSM file, download 129
save plate file 119
troubleshooting 502
plate properties
enter, instrument 88
instrument, description 265
plate type
specify 265
supported 539
PNG file, save for electropherogram 190
polymer
catalog numbers and storage 26
handling 370
maintenance wizard 417
on-instrument limits 26
precautions for use 370
replenish 370
store 371
storing partially used pouch 371
Polynomial Degree 295
power on or power off the instrument 485
power requirements 531, 533
power save duration 459
pre-run checks
automated barcode run 149
SeqStudio ™ Flex Series Genetic Analyzer with Instrument Software v1.0 User Guide
standard 267, 268
plicon, specimen 267, 268, 271
See also plate file, Plate Manager
126