Thermo Scientific appliedbiosystems SeqStudio Flex Series User Manual page 567

change capillary array 382
fill capillary array 409
procedures 382
reactivate the instrument 427
remove bubbles 409
replenish buffers 413
replenish polymer 417
shut down the instrument 420
spatial calibration 412
wash pump and channels 415
maintenance wizards
change capillary array 359, 371
change polymer type 359
fill array with polymer 359
instrument reactivate 382
overview 359
reactivate instrument 359
remove bubbles 359, 377
replenish buffers 359, 364
replenish polymer 359, 370
shut down instrument 359
spatial calibration 359
troubleshooting 501
wash pump and channels 359, 379
maintenance, consumables
anode buffer, change 364
capillary array, change 371
capillary array, check stored 375
cathode buffer, change 367
polymer, replenish 370
polymer, store partially used pouch 371
maintenance, instrument
annual planned 358
as-needed 358
daily 356
history, export 64, 355
monthly 357
move and level the instrument 381
pump 376
pump, flush water trap 379
pump, remove bubbles 377
pump, wash chamber and channels 379
reactivate 382
routine cleaning 361
schedule 354
shut down 381
upcoming 64, 355
manual commands
move buffer position 483
move instrument components 483
matrix standards, catalog numbers 541
Median PUP, defined 176
microphone
icon, troubleshooting
SeqStudio ™ Flex Series Genetic Analyzer with Instrument Software v1.0 User Guide
icons 235
self test 485
voice commands 232, 234
Microsatellite Analysis software, results, download
207
MicroSEQ ID install run. See install run
Min. Peak Half Width 295
MOB (mobility) file for sequencing analysis 291
mobile device
monitor a run 195
register on InstrumentConnect 193
view results 195
monitor a run
instrument 153
mobile device 195
Run queue 160
Thermo Fisher Connect 182
monthly instrument maintenance 357
move the instrument 381
MSA software. See Microsatellite Analysis software
My preference 468
N
network
configure settings for instrument connection
(software) 464
connect instrument to 445
connection (hardware) 439–441, 535
connection on rear panel 22, 537
icon is not displayed in the home screen
network configuration and security 52, 99, 110
network folder
create 444
share 444
Next Generation Confirmation software, results,
download 207
NGC software. See Next Generation Confirmation
software
normalization
See also size standard normalization
GS600 LIZ v2.0 size standard 275
size standards 275
See also size standard normalization
notifications
during run 149
from instrument, email 189, 226, 454
from instrument, view on cloud 188
O
off-scale recovery, custom dye set 286
Optimized successfully, spectral calibration status
152
Index
567