Psm And Csv Plate Setup Files For Import Into The Instrument - Thermo Scientific Applied Biosystems SeqStudio Genetic Analyzer User Manual

6
Chapter 6 Create or modify a plate setup from the instrument

PSM and CSV plate setup files for import into the instrument

PSM and CSV plate setup files for import into the instrument

Format
PSM
Create by:
Saving a plate setup
™
with the SeqStudio
Plate Manager desktop
or Connect cloud-based
platform
CSV
Create by:
• Saving as CSV in
™
the SeqStudio
Plate Manager
desktop or Connect
cloud-based
platform
• Downloading a
template from the
™
SeqStudio Plate
Manager desktop
or Connect cloud-
based platform
78
Contains...
names and
• Size standard
definitions
names and settings
• Run module
names and settings
• Dye set
names and
• Analysis settings
settings
• All remaining plate setup field
settings: Well ID, Sample name,
Application type and so on.
names only
• Size standard
name only
• Dye set
names only
• Run module
• All remaining plate setup field
settings: Well ID, Sample name,
Application type and so on.
To create a plate setup that contains all the
properties needed to save and run the plate setup.
Note the following:
• If the size standard, analysis settings, or run
module in the PSM file do not exist on the
instrument, they are automatically created
when the PSM file is imported.
• If the Plate setup security is set to Hidden:
– The plate setup is available for selection
on the instrument only to the user who
created the PSM file.
To update properties of the plate setup (such as
sample name)
run module for the plate setup have been created
or imported on the instrument.
When you import a CSV file:
• If the size standard, dye set, or run module in
the CSV file
– An error message is displayed.
– The CSV file is not imported on the
instrument.
• If the size standard or run module in the CSV
do exist on the instrument:
file
– The CSV file is imported on the
instrument.
– The settings from the size standard, dye
set, and run module that exist on the
instrument are used (because the CSV
file contains the names of these
elements, but not the settings).
– The Plate setup security is set to Hidden.
SeqStudio Genetic Analyzer Instrument and Software User Guide
™
When to use...
after the size standard, dye set, and
do not exist on the instrument: