Thermo Scientific Applied Biosystems SeqStudio Genetic Analyzer User Manual page 240

Index
loading guidelines 38
pause 106
Plate Manager
add custom dye calibration 122
operating system requirements 25
plate setup
create on instrument 81
CSV file, import 81
delete 124
guest 70, 79
hidden (my plates) 76, 89
hidden (my plates), definition 79
hidden (my plates), set in Plate Manager 70
import from CSV or PSM file 139
import on instrument 81
open 81
PSM file, import 81
security 76, 89
security, definition 79
security, set in Plate Manager 70
set default open location on Connect cloud-based
platform 132
set default open location on network 133
shared (public) 76, 89
shared (public), definition 79
shared (public), set in Plate Manager 70
template 122, 123
plate type supported 37
polymer delivery system (PDS), refresh 161
private plate setup. See hidden
probablility of error 117
profile. See instrument profile
PSM file
See also plate setup
create or open in Plate Manager 69
import 81
See also plate setup
public plate setup 76, 89
See also shared
pull-up reduction (HID analysis only) 67, 79
Q
Q and Condition 197
QC report, export 120
quality flag 113
quality value
See also QV
probability of error 117
spectral calibration 196
See also QV
QV, probability of error 117
QV ranges 116
QV30 CRL 208
240
R
raw data 171
raw trace, remote monitor 100
re-inject, remote monitor 100
re-injection 91, 105, 120
related documentation 169, 236
remote monitor
analyzed trace 102
EPT plot 101
pause or cancel run 99
raw trace 100
re-inject 100
view results 99, 110
remove plate associated with inactive user 155
replicate injection 74, 87
results
export automatically 80
export manually 121, 154
view, instrument 111
view, mobile device 103
view, remote monitor 99, 110
results report, export 120
RFID read and write 20
run, pause or cancel 106
run history, delete 155
run module
read length and run time 140, 218
settings 140
size range and run time 140, 218
S
SAE
enable on instrument 59
overview 56
server, specify 59
safety, biohazard 235
safety practices 225
safety, required equipment 226
sample
plates and tubes supported 37
purification 37
stability on instrument 38
volume requirements 37
sample plate. See plate
secondary analysis software 29
sequence quality 116
sequencing
results 115
run module, read lengths and run times 140, 218
sequencing settings
description 129, 146
PCR amplicons from diploid genes 129, 146
SeqStudio Genetic Analyzer Instrument and Software User Guide
™