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GeoMx DSP Instrument User Manual
Changes in This Revision
Changes in This Revision
This GeoMx DSP Instrument User Manual (MAN- 10152- 01) replaces the GeoMx- NGS
Instrument User Manual (SEV-00087-05) and GeoMx-nCounter Instrument User Manual (SEV-
00065-07).
NGS- specific information is separated from nCounter- specific information with colored text
boxes, as described in
Conventions on page 7
Other changes in this manual revision include:
Extended safe storage guidelines for protein and RNA slides
l
Added instructions to edit a probe kit configuration (.pkc) file after collection
l
Added instructions to synchronize system time with internet time server
l
Improved the GeoMx DSP hibernation protocol for instruments that will be inactive for >2
l
weeks
on page 106
Added an Instrument Best Practices guide
l
Added a Troubleshooting section
l
For NGS readout:
Added guidance for users running standalone
l
custom RNA-NGS assays without an Atlas
product (such as WTA or CTA)
Added instructions to connect the GeoMx
l
®
DSP to an Illumina
enable seamless end-to-end run integration,
and to launch the seamless end-to-end
workflow from the GeoMx DSP
Updated guidance on i5 index read direction
l
for Illumina sequencer models and kits
page 64
FOR RESEARCH USE ONLY. Not for use in diagnostic procedures.
6
on page 110
on page 111
on page 39
BaseSpace workgroup to
on page 63
on
MAN-10152-01 for software v2.5
and shown below.
on page 60
For nCounter readout:
There are no nCounter-specific updates
to this user manual.
on page 69
on page 96
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