nanoString GeoMx DSP User Manual page 50

Instrument
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GeoMx DSP Instrument User Manual
Select ROIs & Segment
Use the eye icon in each segment definition box to toggle all segments of that definition
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between visible and invisible
Use the Channel Thresholds grid to customize thresholds for each individual ROI or use
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the Override All row to customize thresholds to the same value for every ROI. For each
channel, if there is a value greater than 0 in the Override All row, that value will be used for
all ROIs for that channel.
Use the Revert Thresholds button to revert to the default channel settings.
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Note that the collection order, well order, and name order of segments may differ from each
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other, as the system optimizes aspirate collection to reduce complexity.
IMPORTANT:
If you made changes to segment definitions, ensure that you have clicked the
Save Changes button before exiting the Scan Workspace. If you do not do this, the changes to
the segment definitions will not be applied to the scan.
FOR RESEARCH USE ONLY. Not for use in diagnostic procedures.
50
MAN-10152-01 for software v2.5

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