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GeoMx DSP Instrument User Manual
Scan Slides
Scan Slides
Before the system's 20x scan, it checks the tissue area. You may accept the default parameters
automatically detected by the system, or customize them.
Define Scan Area
The scan area result is displayed
tissue on the slide. This minimizes scan time and avoids unnecessary consumption of disk
space. Areas within green boundary lines will be scanned. To adjust:
Zoom in and out using the scroll wheel on your mouse or a pinch-zoom movement on your
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touch screen or touch pad.
Adjust the scan area using the X- and Y- sliders to define the area you would like to analyze.
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Use the Minimum Tissue slider to filter out particles from the image. Sliding it too far may
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cause small areas of tissue to be excluded from the image.
Use the Sensitivity slider to adjust the intensity at which the instrument identifies tissue.
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IMPORTANT:
The minimum scan area is 1.5 mm x 1.5 mm.
Click through all slides using the Previous Slide or Next Slide buttons.
FOR RESEARCH USE ONLY. Not for use in diagnostic procedures.
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(see Figure
19). Use the tools in this window to select only the
Figure 19: Scan area definition adjustment
MAN-10152-01 for software v2.5
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