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MAN-10152-01 for software v2.5
GeoMx DSP Instrument Maintenance
b. Define a scan area in the low magnification scan to proceed to the high magnification scan.
c. When the high magnification scan is complete, the system will initiate cleaning and move to
the Collection Complete idle software state.
d. Once at the Collection Complete idle software state, click on Remove Slides and
Microplate.
e. When prompted, open the door to retrieve the slide holder. Store the slide, thoroughly clean
the slide holder, and return the slide holder to inside the instrument.
f. Remove the collection plate and keep as a spare.
g. When finished, close the door to the instrument.
3. Turn off the instrument (optional):
a. Select the Administration tab from the GeoMx DSP Control Center.
b. Select System Settings, then System Shutdown, then Shutdown System.
c. When the screen turns black (after ~30 seconds), power off by flipping the switch on the
back-right of the instrument.
Return the system to operational:
1. Switch DEPC-treated water bottles to Buffer S bottles. Perform these steps without launching
the Change Reagents wizard.
a. Open the bottle bay door and unscrew the bottle cap assemblies from the DEPC-treated
water bottles in slots 1 and 4.
b. Replace these two bottles with the Buffer S that was removed previously. Close the bottle
bay door.
2. Power On the instrument, if it was off:
a. Flip the switch on the back-right of the instrument to On. The system will boot up, which may
take a few minutes.
b. Log in to the Control Center using an administrative user account.
3. Prime lines and bring to an idle software state:
a. Start a new run using Assist (wrench icon), Restart Data Collection Workflow; then click
Data Collection, New Data Collection. When prompted:
FOR RESEARCH USE ONLY. Not for use in diagnostic procedures.
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