Create A Planned Run - Thermo Scientific Ion 520 User Manual

Chapter 3 Create a Planned Run
3

Create a Planned Run

Create a Planned Run
1. Sign in to the Torrent Suite
2. In the Plan tab, in the Templates screen, select the application that you want to run (such as
Whole Genome) from the left navigation menu, then click one of the following options:
• Plan New Run—to plan a new run using the Generic Sequencing template for the selected
application.
•
(Actions)4Plan Run in the row of the template—to plan a new run using a specific
Planned Run template.
3. In the Create Plan workflow bar, review the IonReporter and Research Application steps, then
make selections appropriate to your run. Click Next.
4. In the Kits step, make the following selections:
a. Select Ion GeneStudio
b. Select the appropriate chip type in the Chip Type dropdown list.
c. Select the library kit used to prepare your libraries from the Library Kit Type dropdown list.
d. (Optional) For barcoded libraries, select the barcode set used during library preparation from
the Barcode Set dropdown list.
e. Select IonChef for Template Kit, then select Ion 520 & Ion 530 ExT Kit-Chef from the
Template Kit dropdown list.
f. Select Ion S5 ExT Sequencing Kit from the Sequencing Kit dropdown list.
18
™
Software.
™ S5 System from the Instrument dropdown list.
Ion 520 ™ & Ion 530 ™ ExT Kit − Chef User Guide