1.6.1
Product ion mode
Product, or daughter, ion mode is the most commonly used MS/MS operating mode. You can
specify an ion of interest for fragmentation in the collision cell, thus yielding structural information.
Figure 1–4:
1.6.1.1
Typical applications
Product ion mode is typically used for the following applications:
•
Method development for MRM quantitative analyses:
–
Identifying product ions for use in MRM transitions.
–
Optimizing CID tuning conditions to maximize the yield of a specific product ion to be
used in MRM analysis.
•
Structural elucidation (for example, peptide sequencing)
Product ion mode
MS1
Static (at precursor mass)
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Collision cell
Fragmenting precursor
ions and passing all
masses
MS2
Scanning