Displaying Results In The Mapping Analysis Window - Newport iServer MicroServer iTHX-M Operator's Manual

Displaying Results in the Mapping Analysis Window

• Perform Loss of Heterozygosity
(see page 247)
• Sort the SNP Table (see
• Search the table for a text string (see
• Export content from the table (see
• Graphically display the quality of genotype calls in a scatter plot
(MPAM and DM only). See
• Group arrays by different attributes and display the data as a
virtual array with the VirtualSet tools (see
Virtual Arrays, on page
• Drill down to view cell intensity data for a selected SNP in the
Probe Intensity window
Probe Intensity Data, on page
After sample analysis (see
you can view the data files in the GTYPE mapping analysis window.
To open analyzed sample data in the mapping analysis window,
perform one of the following actions:
• Drag and drop a CHP file from a previously run analysis; the
mapping analysis window opens automatically.
• Right-click the selectd CHP files and select Open in the shortcut
menu.
→
• Select File Open, choose the CHP files you want to view, and
click OK; the mapping analysis window opens automatically.
• Use the VirtualSet tool to display multiple arrays, derived from
the same sample, as a virtual array set (see
Virtual Arrays, on page
To open analysis results from the data tree:
Select the analysis results that you want to view.
1.
Chapter 5 | Mapping Analysis Window
studies between selected arrays
page 157)
page 158)
page 159)
Scatter Plots, on page
193)
(for more information, see
264)
Analyzing Cell Intensity Data, on page
193).
141
164.
Displaying Data in
Displaying
105),
Displaying Data in