Index - illumina MiSeq System Manual

Index

A
activity indicators 6
analysis
options 6
analysis workflow
definition 4
B
BaseSpace
connection 6
updates 12
BaseSpace Onsite
connection 6
server location 11
blinking icons 5
BlueFuse Multi software 6, 11
bundle logs 38-39, 41
C
cluster generation 17
CompletedJobInfo.xml 7
components
flow cell 8, 49
flow cell compartment 2-3
optics module 2
reagent cartridge 9
reagent compartment 2-3
consumables 13
laboratory-grade water 13
control software 5
copying files and folders 38
customer support 55
cycles in a read 15
D
deleting files and folders 38
disk space
checking 8
documentation 1, 55
domain name 46
E
email alerts 12
Document # 15027617 v04 Material # 20024228
For Research Use Only. Not for use in diagnostic procedures.
errors 5
F
flow cell
cap color 9
cleaning 21
letter designator 44
overview 8
single-lane 8
tile numbering 50
tiles 49
flow cell clamp 3
flow cell compartment 2-3
flow cell door sensor 6
fluidics
troubleshooting 45
washing 34, 36
folder locations
default settings 12
for current run 26
G
genome references 38
H
help, technical 55
I
icons
activity indicators 6
sensors 6
icons, blinking 5
idling the instrument 36
Illumina Proactive monitoring service 12
InterOp files 5
InterOp folder 48
IP address 46
L
laboratory-grade water guidelines 13
loading reagents
cartridge 25
PR2 24
51