Making An Automatic Run Using Masslynx Software - Waters 2690 Quick Start Manual

4. From Millennium³² software, run the samples in Run Samples (QuickSet in
Millennium versions earlier than 3.20) using the method set you created in step
3 above. When you enter Run Samples, use the HPLC system you created in
step 1, above. Refer to the Millennium documentation for information on using Run
Samples.
5. Process and print out the data acquired from the chromatographic run. Refer to
the Millennium documentation for information on developing a processing method.
Note: You can operate the Separations Module from its front panel whenever Run
Samples is not running on the Millennium Chromatography Manager workstation.
4.3 Making Automatic Runs Under MassLynx Control
If your Separations Module is configured for MassLynx software control (versions 3.1,
Build 004 and later), you make an automatic run from the MassLynx software. When the
Separations Module is running under MassLynx control, the word "Remote" appears in the
banner area.

Making an Automatic Run Using MassLynx Software

To make an automatic run, perform the following steps at the Micromass MassLynx
computer:
1. Configure an LC-MS system that includes the Separations Module. Refer to
MassLynx online Help for information on configuring an inlet system.
2. From the Inlet Editor, create an LC method for the Separations Module and
detector (other than the mass spectrometer). Refer to MassLynx online Help for
information on using the Inlet Editor.
3. Acquire a single sample from the Inlet Editor. To acquire multiple samples, create a
sample processing list from the MassLynx Top Level screen. Refer to MassLynx
online Help for information on sample processing lists and acquisition.
4. Process and print out the data acquired from the chromatographic run. Refer to
MassLynx online Help for information on processing data.
You can operate the Separations Module from its front panel whenever MassLynx is not
running.
46 Making Automatic Runs