Half-size cpu card with lcd, ethernet, & ssd (112 pages)
Summary of Contents for Aaeon GENE-APL6
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GENE-APL6 3.5” Subcompact Board User ’s Manual 5 Last Updated: October 27, 2021...
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AAEON assumes no liabilities resulting from errors or omissions in this document, or from the use of the information contained herein. AAEON reserves the right to make changes in the product design without notice to its users.
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Acknowledgements All other products’ name or trademarks are properties of their respective owners. Microsoft Windows is a registered trademark of Microsoft Corp. ⚫ Intel®, Pentium®, and Celeron® are registered trademarks of Intel Corporation ⚫ Intel Atom™ is a trademark of Intel Corporation ⚫...
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Packing List Before setting up your product, please make sure the following items have been shipped: I t em Quantity GENE-APL6 MB ⚫ Heat Spreader ⚫ If any of these items are missing or damaged, please contact your distributor or sales representative immediately.
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(if any), its specifications, dimensions, jumper/connector settings/definitions, and driver installation instructions (if any), to facilitate users in setting up their product. Users may refer to the product page at AAEON.com for the latest version of this document. Preface...
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Saf e ty Precautions Please read the following safety instructions carefully. It is advised that you keep this manual for future references All cautions and warnings on the device should be noted. Make sure the power source matches the power rating of the device. Position the power cord so that people cannot step on it.
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If any of the following situations arises, please the contact our service personnel: Damaged power cord or plug Liquid intrusion to the device iii. Exposure to moisture Device is not working as expected or in a manner as described in this manual The device is dropped or damaged Any obvious signs of damage displayed on the device...
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FCC Statement This device complies with Part 15 FCC Rules. Operation is subject to the following two conditions: (1) this device may not cause harmful interference, and (2) this device must accept any interference received including interference that may cause undesired operation.
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Chi na RoHS Requirement (EN) Poisonous or Hazardous Substances or Elements in Products AAEON Main Board/ Daughter Board/ Backplane Poisonous or Hazardous Substances or Elements He xavalent Polybrominated Polybrominated C omponent Le ad Me rcury C admium C hromium Biphenyls...
Spe cifications System F o rm Factor 3.5'' Subcompact Board CP U Intel® Atom™/ Celeron®/ Pentium® Processor : Pentium N4200 (4C/4T, 1.10 GHz, up to 2.5 GHz) Celeron N3350 (2C/2T, 1.10 GHz, up to 2.40 GHz) Atom E3950 (4C/4T, 1.60 GHz, up to 2.00GHz) Atom E3940 (4C/4T, 1.60GHz, up to 1.80GHz) Atom E3930 (2C/2T, 1.30GHz, up to 1.80GHz) CP U TDP...
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Powe r Po wer Requirement +9-36V (Optional: +12V) Po wer Supply Type AT/ATX Co nnector Phoenix 2-pin Connector Po wer Consumption Typical 2.36A at +12V with Intel® E3950, DDR3L 1866MHz 8GB Po wer Consumption Max 2.41A at +12V with Intel® E3950, DDR3L 1866MHz 8GB Di splay Co ntroller...
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Internal I/O U SB USB2.0 x 2 Serial Port COM2, COM3 (RS232/422/485, supports 5V/12V/RI) COM4 (RS232) Vid eo LVDS1 x 1 LVDS2/HDMI x 1 (Default LVDS2) SATA SATA III x 1 +5V SATA Power Connector x 1 A ud io Audio Header x 1 DI O/GPIO 8-bit...
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E nvironment Op erating Temperature 32°F ~ 140°F (0°C ~ 60°C) St orage Temperature -40°F ~ 176°F (-40°C ~ 80°C) Op erating Humidity 0% ~ 90% relative humidity, non-condensing MTBF (Hours) 374,567 EMC Certification CE/FCC Class A Chapter 1 – Product Specifi c ations...
2.5 Li st of Jumpers Please refer to the table below for all of the board’s jumpers that you can configure for your application Lab el F unction JP 1 Front Panel Connector JP 2 COM2 Pin8 Function Selection JP 3 COM3 Pin8 Function Selection JP 4 LVDS Port2 Backlight Lightness Control Mode Selection...
2.5.1 Front Panel Connector (JP1) P in P in Name P in P in Name PWR_BTN- PWR_BTN+ HDD_LED- HDD_LED+ BUZZER- BUZZER+ PWR_LED- PWR_LED+ H/W RESET- H/W RESET+ 2.5 .2 COM2 Pin8 Function Selection ( JP2) +12V Ring (Default) Chapter 2 – Hardware Information...
2.5 .6 LVDS Port1 Backlight Inverter VCC Selection ( JP6) +12V +5V (Default) +3.3V (Default) 2.5 .7 LVDS Port1 Backlight Lightness Control Mode Selection ( JP7) 1 2 3 VR Mode (Default) PWM Mode 2.5.8 Auto Power Button E nable/Disable Selectio n (JP8) Disable/ATX Enable/AT (Default) N o te: When disabled, the power button of JP5 (1-2) will be used to power on the...
2.6 Li st of Connectors Please refer to the table below for all of the board’s connectors that you can configure for your application Lab el F unction CN 1 External +5VSB Input CN 2 +5V Output for SATA HDD CN 3 External Power Input CN 4...
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Lab el F unction CN 24 LAN (RJ-45) Port2 CN 25 COM Port 1 (Wafer, Optional) CN 26 Dual USB3.0 Connector Port 0/ Port 1 CN 27 COM Port 1 (D-SUB 9) CN 28 Battery Connector CN 29 HDMI Connector CN 30 VGA Port DI MM1...
2.6 .1 E xternal +5VSB Input ( CN1) P in P in Name Sig nal Type Sig nal Level PS_ON# +5VSB N o te 1: Since every power supply discharge design is different, we recommend restarting 3 seconds after powering off to make sure ATX power is fully discharged, or make sure 5V standby power has been discharged to under 2V.
2.6.3 E xternal Power Input ( CN3) +VIN GND P in P in Name Sig nal Type Sig nal Level +VIN 9V~36V or 12V N o te 1: There are two types of power input, 9V~36V or 12V only. Input type can be adjusted in BIOS.
P in P in Name Sig nal Type Sig nal Level SATA_RX- DIFF SATA_RX+ DIFF 2.6.5 CPU FAN (Optional) ( CN5) P in P in Name Sig nal Type Sig nal Level FAN_POWER +12V FAN_TAC N o te: The maximum current rating of Pin#2/FAN_POWER is 0.5A. Chapter 2 –...
2.6.6 Audi o I/O Port (CN6) P in P in Name Sig nal Type Sig nal Level MIC_L MIC_R GND_AUDIO LINE_L_IN LINE_R_IN GND_AUDIO LEFT_OUT GND_AUDIO RIGHT_OUT +5V_AUDIO 2.6.7 Mi ni-Card Slot ( Full-Size) (CN7) P in P in Name Sig nal Type Sig nal Level PCIE_WAKE# +3.3VSB...
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P in P in Name Sig nal Type Sig nal Level +1.5V +1.5V PCIE_CLK_REQ# UIM_PWR UIM_DATA PCIE_REF_CLK- DIFF UIM_CLK PCIE_REF_CLK+ DIFF UIM_RST UIM_VPP W_DISABLE# +3.3V PCIE_RST# +3.3V PCIE_RX- DIFF +3.3VSB +3.3V PCIE_RX+ DIFF +1.5V +1.5V Chapter 2 – Hardware Information...
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P in P in Name Sig nal Type Sig nal Level SMB_CLK +3.3V PCIE_TX- DIFF SMB_DATA +3.3V PCIE_TX+ DIFF USB_D- DIFF USB_D+ DIFF +3.3VSB +3.3V +3.3VSB +3.3V +1.5V +1.5V +3.3VSB +3.3V Chapter 2 – Hardware Information...
2.6 .8 COM Port 2 ( CN8) R S232 P in P in Name Sig nal Type Sig nal Level DCD2 DSR2 RTS2 ±5V ±5V CTS2 DTR2 ±5V RI2/+5V/+12V +5V/+12V Chapter 2 – Hardware Information...
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R S485 P in P in Name Sig nal Type Sig nal Level RS485_ D2- ±5V RS485_D2+ ±5V NC/+5V/+12V +5V/+12V R S422 P in P in Name Sig nal Type Sig nal Level RS422_TX2- ±5V RS422_TX2+ ±5V RS422_RX2+ RS422_RX2- NC/+5V/+12V +5V/+12V N o te 1: COM2 RS-232/422/485 can be set by BIOS setting.
2.6.9 COM Port 3 ( CN9) R S232 P in P in Name Sig nal Type Sig nal Level DCD3 DSR3 RTS3 ±5V ±5V CTS3 DTR3 ±5V RI2/+5V/+12V +5V/+12V Chapter 2 – Hardware Information...
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R S485 P in P in Name Sig nal Type Sig nal Level RS485_ D3- ±5V RS485_D3+ ±5V NC/+5V/+12V +5V/+12V R S422 P in P in Name Sig nal Type Sig nal Level RS422_TX3- ±5V RS422_TX3+ ±5V RS422_RX3+ RS422_RX3- NC/+5V/+12V +5V/+12V N o te 1: COM3 RS-232/422/485 can be set by BIOS setting.
2.6.11 mSATA Slot (Half-Sized) ( CN11) P in P in Name Sig nal Type Sig nal Level +3.3V +3.3V SRXP_PRXN DIFF +3.3V +3.3V Chapter 2 – Hardware Information...
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P in P in Name Sig nal Type Sig nal Level SRXN_PRXP DIFF STXN_PTXN DIFF STXP_PTXP DIFF +3.3V +3.3V +3.3V +3.3V Chapter 2 – Hardware Information...
P in P in Name Sig nal Type Sig nal Level +3.3V +3.3V 2.6.12 LPC Port ( CN12) P in P in Name Sig nal Type Sig nal Level LAD0 +3.3V LAD1 +3.3V LAD2 +3.3V LAD3 +3.3V +3.3V +3.3V LFRAME# LRESET# +3.3V LCLK...
2.6 .13 LVDS Port2 ( CN13) Note: LVDS LCD_PWR2 can be set to +3.3V or +5V by JP5. Driving current supports up to 1A. P in P in Name Sig nal Type Sig nal Level BKL_ENABLE2 BKL_CONTROL2 LCD_PWR2 +3.3V/+5V LVDS2_A_CLK- DIFF LVDS2_A_CLK+ DIFF...
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P in P in Name Sig nal Type Sig nal Level LVDS2_DA2- DIFF LVDS2_DA2+ DIFF LVDS2_DA3- DIFF LVDS2_DA3+ DIFF DDC2_DATA +3.3V DDC2_CLK +3.3V LVDS2_DB0- DIFF LVDS2_DB0+ DIFF LVDS2_DB1- DIFF LVDS2_DB1+ DIFF LVDS2_DB2- DIFF LVDS2_DB2+ DIFF LVDS2_DB3- DIFF LVDS2_DB3+ DIFF LCD_PWR2 +3.3V/+5V LVDS2_B_CLK- DIFF...
2.6.14 Mi cro SIM Card Socket ( CN14) P in P in Name Sig nal Type Sig nal Level UIM_PWR UIM_RST UIM_CLK UIM_VPP UIM_DATA Chapter 2 – Hardware Information...
2.6.15 BIOS Debug Port ( CN15) P in P in Name Sig nal Type Sig nal Level SPI_MISO SPI_CLK +3.3VSB +3.3V SPI_MOSI SPI_CS Chapter 2 – Hardware Information...
2.6.16 LPT Port or Digital I/O Port (CN16) N o te 1: LPT or Digital I/O function can be selected by BIOS setting. Default is LPT port N o te 2: The maximum current rating of Pin#26/5V is 1A. LP T Port P in P in Name Sig nal Type...
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LP T Port P in P in Name Sig nal Type Sig nal Level ACK# BUSY SLCT Dig ital I/O Port P in P in Name Sig nal Type Sig nal Level DIO0 Chapter 2 – Hardware Information...
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Dig ital I/O Port P in P in Name Sig nal Type Sig nal Level DIO1 DIO2 DIO3 DIO4 DIO5 DIO6 DIO7 Chapter 2 – Hardware Information...
2.6.17 LVDS Port2 Inverter / Backlight Connector ( CN17) BLK_PWR BKL_CONTROL BKL_ENABLE P in P in Name Sig nal Type Sig nal Level BKL_PWR +5V / +12V BKL_CONTROL BKL_ENABLE N o te 1: LVDS LCD_PWR2 can be set to +5V or +12V by JP5. The driving current supports up to 1.5A.
2.6.18 LVDS Port1 (CN18) PIN 29 PIN 30 PIN 1 PIN 2 N o te: LVDS LCD_PWR2 can be set to +3.3V or +5V by JP6. The driving current supports up to 1.5A. P in P in Name Sig nal Type Sig nal Level BKL_ENABLE BKL_CONTROL...
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P in P in Name Sig nal Type Sig nal Level LVDS_DA2+ DIFF LVDS_DA3- DIFF LVDS_DA3+ DIFF DDC_DATA +3.3V DDC_CLK +3.3V LVDS_DB0- DIFF LVDS_DB0+ DIFF LVDS_DB1- DIFF LVDS_DB1+ DIFF LVDS_DB2- DIFF LVDS_DB2+ DIFF LVDS_DB3- DIFF LVDS_DB3+ DIFF LCD_PWR +3.3V/+5V LVDS_B_CLK- DIFF LVDS_B_CLK+ DIFF...
2.6.19 USB 2.0 Port 4 ( CN19) P in P in Name Sig nal Type Sig nal Level +5VSB USB_D- DIFF USB_D+ DIFF 2.6.20 USB 2.0 Port 5 ( CN20) P in P in Name Sig nal Type Sig nal Level +5VSB USB_D- DIFF...
2.6 .21 LVDS Port1 Inverter / Backlight Connector ( CN21) P in P in Name Sig nal Type Sig nal Level BKL_PWR +5V / +12V BKL_CONTROL BKL_ENABLE N o te 1: LVDS LCD_PWR2 can be set to +5V or +12V by JP6. The driving current supports up to 1.5A.
2.6.22 Touch Screen Connector (Optional) ( CN22) N o te: Touch mode can be set by BIOS setting 8- W ire P in P in Name Sig nal Type Sig nal Level TOP EXCITE BOTTOM EXCITE LEFT EXCITE RIGHT EXCITE TOP SENSE BOTTOM SENSE LEFT SENSE...
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4- W ire P in P in Name Sig nal Type Sig nal Level BOTTOM LEFT RIGHT Chapter 2 – Hardware Information...
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5- W ire P in P in Name Sig nal Type Sig nal Level UL(Y) UR(H) LL(L) LR(X) SENSE(S) Chapter 2 – Hardware Information...
2.6.23 L AN ( RJ-45) Port1 ( CN23) P in P in Name Sig nal Type Sig nal Level MDI0+ DIFF MDI0- DIFF MDI1+ DIFF MDI2+ DIFF MDI2- DIFF MDI1- DIFF MDI3+ DIFF MDI3- DIFF 2.6 .24 L AN ( RJ-45) Port2 ( CN24) ACT/LINK SPEED P in...
P in P in Name Sig nal Type Sig nal Level MDI2- DIFF MDI1- DIFF MDI3+ DIFF MDI3- DIFF 2.6.25 COM Port 1 ( Wafer, Optional) (CN25) P in P in Name Sig nal Type Sig nal Level DCD1 DSR1 RTS1 ±9V ±9V...
2.6.27 COM Port 1 ( D-SUB 9) (CN27) P in P in Name Sig nal Type Sig nal Level ±9V ±9V ±9V 2.6.28 Battery CONN (CN28) P in P in Name Sig nal Type Sig nal Level +3.3V 3.3V Chapter 2 – Hardware Information...
2.6.29 HDMI ( CN29) P in P in Name Sig nal Type Sig nal Level HDMI_TX2+ DIFF HDMI_TX2- DIFF HDMI_TX1+ DIFF HDMI_TX1- DIFF HDMI_TX0+ DIFF HDMI_TX0- DIFF HDMI_CLK+ DIFF HDMI_CLK- DIFF DDC_CLK DDC_DATA HDMI_HPD Chapter 2 – Hardware Information...
2.6.30 VG A Port (CN30) P in P in Name Sig nal Type Sig nal Level GREEN BLUE RED_GND_RTN GREEN_GND_RTN BLUE_GND_RTN DDC_DATA HSYNC VSYNC DDC_CLK 2.6.31 DDR3L SO-DIMM Slot (DIMM1) Standard specifications Chapter 2 – Hardware Information...
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System Test and Initialization The system uses certain routines to perform testing and initialization during the boot up sequence. If an error, fatal or non-fatal, is encountered, the system will output a few short beeps or an error message. The board can usually continue the boot up sequence with non-fatal errors.
3.2 AMI BIOS Setup The AMI BIOS ROM has a pre-installed Setup program that allows users to modify basic system configurations, which is stored in the battery-backed CMOS RAM and BIOS NVRAM so that the information is retained when the power is turned off. To enter BIOS Setup, press <Del>...
3.4.1 Trusted Computing Op tions Summary Security Device Support Disable Enable Optimal Default, Failsafe Default Enables or Disables BIOS support for security device. O.S. will not show Security Device. TCG EFI protocol and INT1A interface will not be available. SHA-1 PCR Bank Disable Enable Optimal Default, Failsafe Default...
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Op tions Summary P latform Hierarchy Disabled Enabled Optimal Default, Failsafe Default Enable or disable Platform Hierarchy St orage Hierarchy Disabled Enabled Optimal Default, Failsafe Default Enable or Disable Storage Hierarchy End orsement Hierarchy Disabled Enabled Optimal Default, Failsafe Default Enable or Disable Endorsement Hierarchy TPM2.0 UEFI Spec Version TCG_1_2 TCG_2...
3.4.3 SATA Configuration Op tions Summary Chip set SATA Disabled Enabled Optimal Default, Failsafe Default Enables or Disables the Chipset SATA Controller. The Chipset SATA controller supports the 2 black internal SATA ports (up to 3Gb/s supported per port). SATA GEN SPEED Auto Optimal Default, Failsafe Default GEN1...
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Op tions Summary mSATA Port Disabled Enabled Optimal Default, Failsafe Default Enable or Disable SATA Port Chapter 3 – AMI BIOS Setup...
3.4.5.1 PCIE Slot (CN7) Op tions Summary P CI E Slot (CN7) Disabled Enabled Optimal Default, Failsafe Default Control PCIE Slot (CN7) Ho t Plug Disabled Optimal Default, Failsafe Default Enabled PCI Express Hot Plug Enable/Disable P CI e Speed Auto Optimal Default, Failsafe Default Gen1...
3.4.6.1 CPU Sm art Fan Mode Configuration Op tions Summary Fan 1 Smart Fan Manual Duty Mode Co ntrol Auto Duty-Cycle Mode Optimal Default, Failsafe Default Smart Fan Mode Select Temperature Source CPU (external) Optimal Default, Failsafe Default System Select the monitored temperature source for this fan. Dut y Cycle 1 Temperature 1 Dut y Cycle 2...
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Op tions Summary Auto fan speed control. Fan speed will follow different temperature by different duty cycle 1-100 Chapter 3 – AMI BIOS Setup...
3.4.7.1 Se ri al Port 1 Configuration Op tions Summary U s e This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Po ssible: Use Automatic Settings Optimal Default, Failsafe Default IO=3F8h; IRQ=4 IO=2F8h; IRQ=3 Allows user to change Device's Resource settings.
3.4.7.2 Se ri al Port 2 Configuration Op tions Summary U s e This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Po ssible: Use Automatic Settings Optimal Default, Failsafe Default IO=2F8h; IRQ=3 IO=3F8h; IRQ=4 Allows user to change Device's Resource settings.
3.4.7.3 Se ri al Port 3 Configuration Op tions Summary U s e This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Po ssible: Use Automatic Settings Optimal Default, Failsafe Default IO=3E8h; IRQ=11 IO=2E8h; IRQ=11 Allows user to change Device's Resource settings.
3.4.7.4 Se ri al Port 4 Configuration Op tions Summary U s e This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Po ssible: Use Automatic Settings Optimal Default, Failsafe Default IO=2E8h; IRQ=10 IO=3E8h; IRQ=10 Allows user to change Device's Resource settings.
3.4.7.5 Paral lel Port Configuration Op tions Summary U s e This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Chapter 3 – AMI BIOS Setup...
3.4.8 Powe r Management Op tions Summary Po wer Mode ATX Type Optimal Default, Failsafe Default AT Type Select system power mode Po wer Saving (ERP) Disabled Optimal Default, Failsafe Default Co ntrol Enabled Configure power mode for power saving function. R estore AC Power Loss Last State Optimal Default, Failsafe Default...
3.4.9 Di gital IO Port Configuration Op tions Summary DI O Port* Output Input Set DIO as Input or Output Out put Level High Optimal Default, Failsafe Default Set output level when DIO pin is output Chapter 3 – AMI BIOS Setup...
3.5.1.1 LVDS Panel Configuration N o te: LVDS2 only available on GENE-APL7-A11 SKUs with two LVDS ports. Op tions Summary LVDS Disabled Enabled Optimal Default, Failsafe Default Enable/Disabled this panel. LVDS Panel Type 640x480@60Hz 800x480@60Hz 800x600@60Hz 1024x600@60Hz 1024x768@60Hz Optimal Default, Failsafe Default 1280x768@60Hz 1280x800@60Hz 1280x1024@60Hz...
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Op tions Summary LVDS Panel Type 1920x1200@60Hz Select panel type Co lor Depth 18-bit Optimal Default, Failsafe Default 24-bit 36-bit 48-bit Select Color Depth B acklight Type Normal Optimal Default, Failsafe Default Inverted Select backlight control signal type B acklight Level Optimal Default, Failsafe Default 100% Select backlight control level...
3.6 Se tup Submenu: Security Change User/Administrator Password Y ou can set an Administrator Password or User Password. An Administrator Password must be set before you can set a User Password. The password will be required during boot up, or when the user enters the Setup utility. A User Password does not provide access to many of the features in the Setup utility.
3.6.1 Se cure Boot Op tions Summary A ttempt Secure Boot Disabled Optimal Default, Failsafe Default Enabled Secure Boot activated when Platform Key (PK) is enrolled, System mode is User/Deployed, and CSM function is disable Secure Boot Mode Standard Customized Optimal Default, Failsafe Default Secure Boot Mode - Custom &...
3.6.1.1 Ke y Management Op tions Summary P rovision Factory Default Disabled Optimal Default, Failsafe Default keys Enabled Allow to provision factory default Secure Boot keys when System is in Setup Mode Chapter 3 – AMI BIOS Setup...
3.7 Se tup Submenu: Boot Op tions Summary Quiet Boot Disabled Enabled Optimal Default, Failsafe Default Enables or disables Quiet Boot option Mo nitor Mwait Disable Enabled Auto Optimal Default, Failsafe Default Enable/Disable Monitor Mwait. To install Linux OS, please set this item to disable. I p v4 PXE Support Disabled Optimal Default, Failsafe Default...
Dri ver Download/Installation Drivers for the GENE-APL6 can be downloaded from the product page on the AAEON website by following this link: https://www.aaeon.com/en/p/embedded-single-board-computers-gene-apl6 Download the driver(s) you need and follow the steps below to install them . St ep 1 – Install Chipset Drivers Open the St ep1 - Chipset folder followed by SetupChipset.exe...
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St ep 4 – Install Audio Drivers Open the St ep4 - Audio folder followed by 0006-64bit_Win7_Win8_Win81_Win10_R279.exe Follow the instructions Drivers will be installed automatically St ep 5 – Install TXE Driver Open the St ep5 - TXE folder followed by Set upTXE.exe Follow the instructions Drivers will be installed automatically St ep 6 –...
CN 9 Molex 51021-0900 1701090150 Connector Cable COM Port4 Serial Port CN 10 Molex 51021-0900 1701090150 Connector Cable 710-74-12T AAEON CN 12 LPC Port PINEX 1703120130 LPC Cable LVDS DF13-30DS- CN 13 HIROSE Connector 1.25C Appendix B – Mating Connectors...
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Mat ing Connector Connector A vailable F unction Cab le P/N Lab el Cab le Vendor Mo del no Digital I/O CN 16 Neltron 2026B-10 Connector LVDS CN 17 Inverter PHR-5 Connector LVDS DF13-30DS- CN 18 HIROSE Connector 1.25C USB Port USB Wafer CN 19 Molex...