Ossila G2001 User Manual

Ossila G2001 User Manual

Optical spectrometer

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Manual version: 1.1.F
Product code: G2001
Product Version: 1.0
Software version: 1.2

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Summary of Contents for Ossila G2001

  • Page 1 Manual version: 1.1.F Product code: G2001 Product Version: 1.0 Software version: 1.2...
  • Page 2: Table Of Contents

    Damage Inspection................................ 8 Specifications.............................. 10 Installation ..............................11 Device Overview ............................11 I/O Expansion Header ..............................11 Ossila Spectrometer Software ........................13 Connecting a Device ..............................13 Window Layout ................................14 Measurement Modes ..............................20 Trigger Modes ................................21 Calibration ..................................22 Peak Finding Parameters ............................
  • Page 3: Overview

    User Manual Overview The Ossila USB powered Optical Spectrometer has been designed to simplify the optical characterisation of thin films, solutions, nanocrystals, photonic structures, and more. A compact enclosure combines with powerful electronics to deliver a fast, reliable, and cost-effective device.
  • Page 4: Eu Declaration Of Conformity (Doc)

    Spectrometer User Manual EU Declaration of Conformity (DoC) Company Name: Ossila BV Postal Address: Biopartner 3 building, Galileiweg 8 Postcode: 2333 BD Leiden Country: The Netherlands Telephone number: +31 (0)718 081020 Email Address: info@ossila.com declare that the DoC is issued under our sole responsibility and...
  • Page 5 Декларация за съответствие на ЕС Производител: Ossila BV, Biopartner 3 building, Galileiweg 8, 2333 BD Leiden, NL. Декларира с цялата си отговорност, че посоченото оборудване съответства на приложимото законодателство на ЕС за хармонизиране, посочено на предходната(-ите) страница(-и) на настоящия документ.
  • Page 6 User Manual [Magyar] EU-s megfelelőségi nyilatkozat Gyártó: Ossila BV, Biopartner 3 building, Galileiweg 8, 2333 BD Leiden, NL. Kizárólagos felelösségünk mellett kijelentjük, hogy a felsorolt eszköz megfelel az ezen dokumentum előző oldalán/oldalain található EU-s összehangolt jogszabályok vonatkozó rendelkezéseinek. [Nederlands] EU-Conformiteitsverklaring Fabrikant: Ossila BV, Biopartner 3 building, Galileiweg 8, 2333 BD Leiden, NL.
  • Page 7: Safety

    The maximum input/output voltage of the Spectrometer’s digital pins is 5V. • Use of Equipment The Ossila Spectrometer is designed to be used as instructed. It is intended for use under the following conditions: Indoors in a laboratory environment (Pollution Degree 2).
  • Page 8: Requirements

    Spectrometer User Manual Requirements The minimum computer specifications for the Ossila Spectrometer software are provided in Table 4.1. Table 4.1. Ossila Spectrometer software requirements. Operating Systems Windows 10 Dual Core 2.0 GHz 2 GB Available Hard Drive Space 300 MB...
  • Page 9 Spectrometer User Manual Figure 5.1. Ossila Spectrometer. Figure 5.2. USB type-A to type-C cable. www.ossila.com Ossila Limited © 2023...
  • Page 10: Specifications

    Spectrometer User Manual Specifications The Ossila Spectrometer technical specifications are shown in Table 6.1. Table 6.1. Spectrometer specifications. Dimensions 78 mm x 78 mm x 38 mm (D x W x H) Weight 150 g Wavelength range 320 nm - 1050 nm...
  • Page 11: Installation

    II. Follow the on-screen instructions to install the software. 2. Connect the unit to your PC using the provided USB type-A to USB type-C cable. Note: The Ossila Spectroscopy software can also be downloaded from www.ossila.com/pages/software-drivers Device Overview Figure 8.1. Hardware overview.
  • Page 12 (5V). Digital output 1. User controllable digital output. Output Digital output 2. User controllable digital output. Output Warning: Do NOT apply a voltage to any output port. It may damage the device. www.ossila.com Ossila Limited © 2023...
  • Page 13: Ossila Spectrometer Software

    Ossila Spectrometer Software Connecting a Device When the software starts, the user will be presented with the device connection box. Any Ossila spectrometer devices connected to the computer that are detected by the software will appear in the dropdown box.
  • Page 14: Window Layout

    User Manual Figure 9.2. Ossila Spectrometer software main window. Window Layout The Ossila Spectrometer software window is separated into areas indicated in Figure 9.2. The function of these areas are briefly outlined below. 9.2.1 Menu Bar Access various features related to device and software settings.
  • Page 15 • Get Reference - Take a reference spectrum. Note that a background spectrum must be • taken first. Note: The functions in the experiment menu are all available as buttons on the Quick Access Menu. www.ossila.com Ossila Limited © 2023...
  • Page 16 When disabled, the workspace can be scrolled (if enough spectra are present in the workspace) so that previously recorded spectra can be check/unchecked while an acquisition is in progress. Figure 9.4. Software window with the standard theme (left) and dark theme (right). www.ossila.com Ossila Limited © 2023...
  • Page 17 Sets the number of successive spectra to sum together. The maximum allowed value is 20. (IV) Averaging Sets the number of successive spectra that are used to calculate a mean value. The maximum allowed value is 99. www.ossila.com Ossila Limited © 2023...
  • Page 18 Displays the current cursor (wavelength and intensity) position on the plot. 9.2.6 Spectra Workspace The current spectrum and any pinned spectra will be visible in this workspace. New spectra are unpinned by default (unless the ‘Pin new spectra’ button is active), meaning that subsequent www.ossila.com Ossila Limited © 2023...
  • Page 19 There are 2 options for the mouse interface behaviour: 1- button mouse and 3-button mouse. This can be selected by right-clicking in the plot area and selecting ‘Mouse Mode’ from the menu. www.ossila.com Ossila Limited © 2023...
  • Page 20: Measurement Modes

    In both modes a specific axis can be controlled by using these controls on the axis labels. Measurement Modes The Ossila Spectrometer software can perform measurements in the following modes: (I) Intensity The raw output from the analogue-to-digital converter is displayed. This can take values between 0 and 65534.
  • Page 21: Trigger Modes

    (������������������������). A background and reference spectrum must be present to select this measurement mode. Trigger Modes The Ossila Spectrometer has three trigger modes that can be selected from the ‘Trigger’ dropdown box in the Measurement Settings. (I) Internal Trigger The start and end times of acquisitions are handled by the spectrometer. The time spent collecting a signal is determined by the integration time.
  • Page 22: Calibration

    40 µs. With the flush disabled this delay is reduced to 15 µs. Calibration The Ossila Optical Spectrometer is factory calibrated for wavelength. Over time, it may be necessary to recalibrate the system. This can be performed by the user. The factory calibration is permanently stored in the system memory, so any user calibration can be reverted to factory calibration if required.
  • Page 23 The pixel numbers and wavelengths do not need to be in ascending order; however, the data pairs must be monotonic (increasing pixel number results in increasing wavelength). Figure 9.7. Known wavelengths associated to pixels. www.ossila.com Ossila Limited © 2023...
  • Page 24: Peak Finding Parameters

    Width – The minimum required full width at half maximum of the peaks. • www.ossila.com Ossila Limited © 2023...
  • Page 25: Saving & Loading

    Figure 9.9. Checked spectra will be saved. Previously saved spectra can be loaded into the software using the ‘Open’ feature in the File menu. A file explorer dialog box will open, and multiple files can be selected for importation. www.ossila.com Ossila Limited © 2023...
  • Page 26: Example: Taking An Absorption Spectrum

    Next, set up the experiment. Absorption measurements require a sample to be placed in between a light source and the spectrometer. In this example we will use the Ossila Broadband White Light Source and the Ossila Spectroscopy Transmission Holder (both sold separately). However, any light source that emits over the range of the required absorption spectrum would be sufficient, and any method of fixing the sample between the light source and the spectrometer is acceptable.
  • Page 27 Next, carefully load the sample into position. The alignment of the apparatus must not change in between taking the reference spectrum and the data. If using optical fibres, do not rearrange their positions at this point. www.ossila.com Ossila Limited © 2023...
  • Page 28 Figure 10.4. Note the data outside of the light source emission range (approximately 370 nm – 850 nm) appears extremely noisy. This is because you cannot calculate the absorption of light if there is no light to be absorbed, therefore this data should be discarded. Figure 10.4. Absorption spectrum. www.ossila.com Ossila Limited © 2023...
  • Page 29: Offset And Gain Adjustment

    Figure 11.1. Dark spectra taken with 3 different offset values: 420 - offset too low, reduces the dynamic range of the device, 455 - offset too high, signal pushed below the detection range of the ADC and 440 – offset correctly set. www.ossila.com Ossila Limited © 2023...
  • Page 30: Sources Of Noise

    Spectrometer User Manual The offset and gain values can be adjusted from within the Ossila Spectrometer Software by opening the command window from the System menu in the toolbar. The <offset?> and <gain?> commands can be used to query the current offset, and the <offset:value> and <gain:value>...
  • Page 31 It can therefore be removed by subtracting a background signal. Figure 12.2 shows an uncorrected and background corrected dark signal at 5 s integration time. Figure 12.2. Uncorrected (1) and background corrected (2) dark spectra taken with a 5 s integration. www.ossila.com Ossila Limited © 2023...
  • Page 32: Periodic Noise

    (2) with background subtraction. It is good practice to use a background correction when performing sensitive measurements. Background and reference spectra should be remeasured if any of the acquisition settings are changed (i.e., integration time, accumulations or averaging). www.ossila.com Ossila Limited © 2023...
  • Page 33: Command Library

    User Manual 13. Command Library The Ossila Spectrometer communicates with a host computer through a serial command library. When connected to a PC, the system will appear as a COM port, to which the serial commands could be sent. This section describes the command protocol and lists the available commands.
  • Page 34: Setting Command List

    X can be 1 or 2. when the system is connected. Boolean. 0 turns LED off, 1 turns LED on. The Turns the power LED on/off. LED is on by default when the system is <led:value> connected. www.ossila.com Ossila Limited © 2023...
  • Page 35 An example of the spectral output of the system will therefore look like: 65354 7 19 …………………………….. 89 76 65355 1600 values An example of reading a spectrum using the Python programming language is given in Section 14. www.ossila.com Ossila Limited © 2023...
  • Page 36: Query Command List

    Returns the device name. <device?> <Ossila Spectrometer> Returns the firmware <firmware:value> where value is the <firmware?> number. firmware version (returned as a float). www.ossila.com Ossila Limited © 2023...
  • Page 37: Example Code

    # The spectrometer will echo back the command if successful response = s.readline().decode() # The response will be <itime:1000> print(response) # We can read a single spectrum from the device using the <read:1> command s.write('<read:1>'.encode()) www.ossila.com Ossila Limited © 2023...
  • Page 38: Maintenance

    # Once the script is complete, close the interface to the spectrometer s.close() 15. Maintenance The Ossila Spectrometer is a sealed unit and should require no maintenance if used under the recommended conditions. www.ossila.com Ossila Limited © 2023...
  • Page 39: Troubleshooting

    16. Troubleshooting The most common issues that can arise will be detailed here, however, if you encounter any issue that isn’t detailed, then please don’t hesitate to contact us by email at info@ossila.com, and we will respond as soon as possible.
  • Page 40: Related Products

    Product code: G2004A1 Product code: G2005A1 Spectrometer Case Optical Breadboard Plate A tough but flexible rubber Solid anodized metric aluminium protective case for the Ossila optical breadboard plate. Optical Spectrometer. Product code: G2006A1 Product codes: G2007A1 www.ossila.com Ossila Limited © 2023...

This manual is also suitable for:

G2001a1

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