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S3061D270RAU6-X2 MS-S389 Server System User Guide...
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Contents Regulatory Notices ..........................5 Safety Information ....................... 8 System Specifications ........................10 Optional Modules for MGT1 ....................... 11 System Overview ........................... 12 Front View ........................... 12 Rear View ............................ 12 MGT1: DC-SCM Module I/O Panel ....................13 System LED Indicators ........................14 MGT1: DC-SCM Module I/O Panel ....................
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Getting Started ..........................43 Necessary Tools .......................... 43 Safety Precautions ........................43 System Setup..........................44 System Node ..........................44 Removing System Node Tray ..................... 44 Drive Bay ............................45 Installing 2.5" Drives (15mm/ 7mm) ..................45 OCP Card ............................46 Installing OCP card ........................
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System Fan............................67 Installing 8080 System Fan Assembly ..................67 Power Supply Unit ......................... 69 Installing Power Supply Unit (PSU) ................... 69 Cable Routing ..........................70 Slide Rail & Rack ..........................71 Attaching the Slide Rails to a Rack .................... 71 Installing the chassis into a Rack ....................
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Chemical Substances Information In compliance with chemical substances regulations, such as the EU REACH Regulation (Regulation EC No. 1907/2006 of the European Parliament and the Council), MSI provides the information of chemical substances in products at: https://csr.msi.com/global/index...
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Chemical Substances Information In compliance with chemical substances regulations, such as the EU REACH Regulation (Regulation EC No. 1907/2006 of the European Parliament and the Council), MSI provides the information of chemical substances in products at: https://csr.msi.com/global/index Battery Information Please take special precautions if this product comes with a battery.
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Safety Information Please read and follow these safety instructions carefully before ⚠ installing, operating or performing maintenance on the server. General Safety Instructions ● Always read the safety instructions carefully. ● Keep this User’ s Manual for future reference. ● Keep this equipment away from humidity. ●...
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Assembly and Installation This equipment must be installed in restricted access areas by qualified personnel to comply with safety standards set by the NEC and IEC 62368-1, Third Edition, for Information Technology Equipment. Lifting and Placement ● WARNING: This server is heavy. ●...
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System Specifications SKU Name S3061D270RAU6-X2 Form factor 2U2N Dimensions 448mm(17.2” ) W x 87mm(3.4” ) H x 745mm(29.3” ) D Single Intel® Xeon® 6700E-series, 6500P-series and 6700P-series processors, TDP up to Processor 350W, per node Socket 1 x Intel® LGA 4710 (Socket E2) Chipset ●...
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SKU Name S3061D270RAU6-X2 Per node: ● 1 x 1000Base-T dedicated server management port ● ASPEED AST2600 with AMI MegaRAC based firmware Server Management - Supports IPMI 2.0 and DMTF Redfish® API ● Dual BIOS and dual BMC supported ● eMMC for local BMC storage media ●...
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System Overview Front View Node 1 Node 2 PCIe Card Slot PCIe Card Slot 6 x 2.5” U.2 Drive Bays 6 x 2.5” U.2 Drive Bays OCP 3.0 Slot MGT1 DC-SCM Module Rear View Power Supply Units Hot-Swap 8080 Fans Hot-Swap 8080 Fans...
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MGT1: DC-SCM Module I/O Panel COM USB Type-A Port This port allows for serial data transmission over a USB connection, enabling remote or direct console access. USB 2.0 Type-A Port This port is provided for USB peripheral devices. (Speed up to 480 Mbps) Important ⚠...
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System LED Indicators MGT1: DC-SCM Module I/O Panel Link/ Activity Speed System Status LED Power Button/ LED UID Button/ LED System Reset Button LED State Description System Power LED Green System power is on System power is on ACPI S0 state Blinking System is sleeping System power is off...
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Power Connectors JPWR1 JPICPWR3 JPICPWR5 JPWR2 JPICPWR2 JPICPWR1 JPICPWR1~2,5 : 12V PICPWR Power Connectors The PICPWR (Platform Infrastructure Connectivity Power) connector enables the HPM (Host Processor Module) to supply power and manage sideband signals to peripherals, including PCIe devices (JPICPWR3), the storage backplane (JPICPWR5), and the Power Distribution Board (JPICPWR1~2).
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JPICPWR2: For Power Distribution Board (12-Pin) Power Signals +12V +12V +12V +12V JPICPWR2 +12V +12V Sideband Management Signals FM_HPM_SOUTH_6_PICPWR_B_SB1 FM_HPM_SOUTH_6_PICPWR_A_SB1 (SB*) (SB*) FM_HPM_SOUTH_6_PICPWR_B_SB2 FM_HPM_SOUTH_6_PICPWR_A_SB2 FM_HPM_SOUTH_6_PICPWR_B_SB3 FM_HPM_SOUTH_6_PICPWR_A_SB3 FM_HPM_SOUTH_6_PICPWR_B_SB4 SB10 FM_HPM_SOUTH_6_PICPWR_A_SB4 SMB_JPICPWR2_B_SCL SB11 SMB_JPICPWR2_A_SCL SMB_JPICPWR2_B_SDA SB12 SMB_JPICPWR2_A_SDA *SB: The term SB stands for “sideband” . JPICPWR3: For PCIe Devices (12-Pin) Power Signals +12V...
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JPICPWR5: For Storage Backplane (6-Pin) Power Signals +12V JPICPWR5 +12V +12V Sideband Management Signals FM_HPM_PICPWR_B FM_HPM_PICPWR_B (SB*) (SB*) FM_HPM_PICPWR_B SMB_PICPWR_A_SCL FM_HPM_PICPWR_B SMB_PICPWR_A_SDA *SB: The term “SB” stands for sideband. JPWR1~2: 4-Pin Power Connectors This connector provides power output to PCIe slot. P12V P3V3 JPWR1~2...
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Cooling Connectors JCOOL3 JCOOL2 FAN0 FAN0: 4-Pin Fan Header (debug only) The fan header supports cooling fans with +12V. When connecting the wire to the connectors, always note that the red wire is the positive and should be connected to the +12V;...
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USB Connectors JUSB3 JUSB3: USB 3.2 Gen 1 Connector The USB (Universal Serial Bus) port is for attaching USB devices such as keyboard, mouse, or other USB-compatible devices. It supports up to 5Gbps and backward compatibility with USB 2.0 devices (480 Mbps). P5V_USB_1 USB2_P3_ESD_D+ USB3_P2_ESD_RX-...
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Other Connectors and Components JFP1~2: DC-MHS Control Panel Header The DC-MHS control panel header for M-PESTI connects the HPM to the server’ s front panel, enabling essential controls such as power, LED indicators, buttons, and sideband signals for management and monitoring. ●...
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JPDB_MGNT: PDB Management Header The PDB Management header connects to the power distribution board (PDB). P12V_STBY_PSU P12V_STBY_PSU JPDB_MGNT ISENSE_I_PSYS VSENSE_LOCAL_V_PSYS P12V_STBY_PSU P12V_STBY_PSU SGPIO_LD SGPIO_CK SGPIO_DO SGPIO_DI SMB_PS_CLK SMB_PS_DAT JPDB_MGNT...
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J1: Power Button Header This header is provided to connect the system power button. FP_PWR_BTN_N J2: Reset Button Header This header is provided to connect the system reset button. FM_RST_BTN_N JIPMB: IPMB Header This header is used to connect the Intelligent Platform Management Bus. SMB_IPMB_LVC5_CON_SDA JIPMB1 SMB_IPMB_LVC5_CON_SCL...
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JVROC1: VROC Connector (debug only) Intel® Virtual RAID on CPU (Intel® VROC) is a hybrid RAID solution specifically designed for NVMe SSDs connected directly to the CPU. PU_KEY_CONN_PIN2_R JVROC1 FM_PCH_SATA_RAID_KEY_R FBP_I2C_1~3: I2C Headers I²C (Inter-Integrated Circuit) headers connect to the System Management Bus (SMBus), FBP_I2C_1~3 are for the backplane.
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OCP0: OCP 3.0 Mezzanine Slot This slot enables the deployment of a wide variety of additional options through OCP (Open Compute Project) network interface cards (NICs) or other expansion cards. For Installation procedure, see “System Setup > OCP Card". OCP: OCP 3.0 SFF (PCIe 5.0 x16) Top Side (B Pins) OB14...
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DC-SCM: 2.0 Edge Slot The slot links the Datacenter Secure Control Module (DC-SCM) to the motherboard, enabling centralized power, management, and security control across server hardware. This standardized interface allows easy upgrades and compatibility across various platforms. For Installation procedure, see “System Setup >...
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JCHASSIS1: Chassis Intrusion Header This header connects to the chassis intrusion switch cable, which monitors and detects any unauthorized opening in the server’ s chassis. When the chassis is opened, this header sends a signal to notify the Baseboard Management Controller (BMC) to record the intrusion event or trigger an alert for administrators.
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TPM: SPI TPM Header (for TPM20-IRS) (on MGT1) This header connects to a TPM (Trusted Platform Module) module (optional). Please refer to the TPM security platform manual for more details. For Installation procedure, see “System Setup > TPM Module". PRSNT# RST# MOSI PIRQ...
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BAT1: CMOS Battery If the CMOS battery is out of charge, the time in the BIOS will be reset and the data of system configuration will be lost. In this case, you need to replace the CMOS battery. Replacing CMOS battery 1.
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Server Board Jumpers Important ⚠ Avoid adjusting jumpers when the system is on; it will damage the motherboard. System Board Jumpers J_PASSWORD_C_1 J_TAG_SEL2 JBAT1 J_UART_SEL_1 JBAT2 JBAT7 Jumper Name Default Setting Description Password Clear Jumper J_PASSWORD_C_1 1-2: Normal (default) 2-3: Clear password JTAG Select Jumper JTAG_SEL_2 1-2: BMC to CPLD...
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Server Board LEDs LED_H1, LED_L1: Port 80 Debug LEDs The Port 80 Debug LEDs display progress and error codes during and after POST (Power-On Self Test). Hexadecimal Character Table Hexadecimal LED display Hexadecimal LED display LED1: BMC Heartbeat LED (on MGT1) This LED indicates the BMC (Baseboard Management Controller) status.
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Getting Started Important ⚠ All information is subject to change without prior notice. ● The system photos are provided for demonstration purposes only. The appearance ● and internal view of your system may vary. Necessary Tools Screwdriver Pliers Tweezers Anti-Static Gloves Safety Precautions The following precautions should be observed while handling the system: ●...
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System Setup Important ⚠ Before removing or installing any components, make sure the system is not turned on or connected to the power. System Node Removing System Node Tray Important ⚠ Power Off Node First! Removing a powered-on node will cause immediate power loss. ●...
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Drive Bay Installing 2.5" Drives (15mm/ 7mm) 1. Push the tray button to release the lever. 2. With the drive carrier rail fully extended, insert the 2.5" drive into the bay. For 15mm drives, remove the entire filler; for 7mm drives, remove the bottom piece ●...
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OCP Card Installing OCP card Follow the steps below: 1. Remove the filler panel. 2. Slide the OCP card into the slot in the chassis, then puch until the OCP card is connected to the connector on the system board. 3.
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DC-SCM Module Installing DC-SCM Module Follow the steps below: 1. Slide the DC-SCM module into the slot, then puch until the module is connected to the connector on the system board. 2. Secure the DC-SCM module with the provided screw to the chassis.
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M.2 3060 Module Installing M.2 3060 Module (on the DC-SCM Module) 1. Insert your M.2 module into the M.2 slot at a 15-degree angle. 15° Supplied M.2 screw 2. Secure the M.2 module in place with the supplied M.2 screw.
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TPM Module Installing TPM Module (on the DC-SCM Module) 1. Place the TPM20-IRS module atop the SPI TPM header. 2. Secure the module in place with the supplied M.2 screw.
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CPU & Heatsink Use appropriate ground straps, gloves and ESD mats to protect yourself from electrostatic discharge (ESD) while installing the processor. CPU0 Important ⚠ While replacing the CPU, always turn off the power supply or unplug the power ● supply’...
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Assembly Overview Important ⚠ Illustrations are for demonstration purposes only; actual parts may vary. 1U EVAC Heatsink 2U EVAC Heatsink Processor Heatsink Module (PHM) Processor Carrier Processor Processor Socket Socket Cover Bolster Plate Important ⚠ Please check the instruction that come with your heatsink and thermal paste for ●...
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Installing CPU & Heatsink 1. Place the processor carrier on top of the processor in the tray with their pin 1 indicators aligned. If installed properly, the CPU will snap into the carrier’ s side latches and the carrier will latch firmly to it. No Shim Shim CPU Carrier: E2A...
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4. Check the heatsink for a diagonally cut corner or the #1clip on the heatsink label if present. Align the processor carrier’ s Pin 1 indicator with the heatsink’ s cut corner (#1 clip), then gently press the heatsink down to engage the carrier’ s latching mechanism to the heatsink at four corners.
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7. Flip 4 anti-tilt wires to the locked position (outward) and make sure the wires are firmly secure. 4 x anti-tilt wires locked Important ⚠ Ensure the 4 anti-tilt wires rotate and lock into the designated positions on the stepped flanges, as specified in the table below for each CPU carrier.
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Recommended Memory Population Please read the following Guidelines before populating memory. ⚠ General Memory Population Rules ● Single DIMM Type Usage: Only one type of DIMM is allowed across the system. Mixing different DIMM types is not permitted. - Example: All DDR5 RDIMMs or all MRDIMMs. ●...
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DIMMs Population (x4/x8) Intel® Xeon® 6700E Series DIMM population within IMC DDR Type Config Set A (x8) Config Set B (x4) Slot 1, Slot 2 Slot 1, Slot 2 x8, None x4, None RDIMM x4, x4 Intel® Xeon® 6700P/ 6500P Series DIMM population within IMC Config Set A (x8) Config Set B (x4)
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Key Parameters for DIMM Intel® Xeon® 6700E Series Speed (MT/s); Voltage (V); DIMM Capacity (GB) Ranks & DIMMs per Channel (DPC) DDR Type DIMM DRAM Density 1DPC 2DPC & Data Width 16 Gb 24 Gb 32 Gb 1.1 V 1DPC 2DPC 1DPC 2DPC...
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DIMM Configuration Intel® Xeon® 6700E Series Slot 1 Slot 2 Slots DIMMs DRAM DIMM Memory DIMM DIMM DIMM DIMM Density Type Channel Channel Organization Channels Ranks & Capacity Ranks & Capacity (Gb) (SPC) (DPC) Width (GB) Width (GB) 2Rx8 32 GB 1 or 2 1Rx4 32 GB...
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Installing Memory Modules 1. Open the side clips to unlock the DIMM slot. 2. Insert the DIMM vertically into the slot, ensuring that the off-center notch at the bottom aligns with the slot. 3. Push the DIMM firmly into the slot until it clicks and the side clips automatically close.
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M.2 SSD Installing M.2 SSD (on the system board, M.2 M Key) 1. Adjust the M.2 board latch to fit your M.2 SSD size. Turn the M.2 board latch ● counterclockwise to release, and clockwise to lock. 2. Insert your M.2 SSD into the M.2 slot at a 15-degree angle.
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Air Duct Installing Air Duct To install the air duct, follow these steps: 1. Insert the back edge of the air duct in the system node with a 45-degree angle. 2. Ensure the two stops ( red-dotted circles) on the air duct are properly aligned with the corresponding stops on the node, and the three hooks ( red circles) snap securely into place.
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PCIe Add-in Card Removing Riser Brackets 1. Remove the screws located on the rear side of the chassis. 2. Slide the riser bracket backward to disengage it. 3. Carefully lift the riser bracket out of the chassis.
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Installing PCIe Add-in Card 1. Loosen the screws on the riser bracket to remove the filler panels. 2. Align the PCIe add-in card with the connector on the riser card, and insert it until it is fully seated. 3. Tighten the screws to securely fix the PCIe add-in card in place. Important ⚠...
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Installing Riser Card Assembly 1. Align the holes on the riser card assembly with the corresponding mounting pins in the system, and lower the assembly into place. 2. Slide the riser bracket backward to secure the riser card assembly. 3. Tighten the screws to firmly fasten the riser card assembly.
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System Fan Installing 8080 System Fan Assembly Install Fan into Fan Cage 1. With the fan aligned, place the fan securely into the fan cage. Ensure the fan’ s rubber parts are engaged with the metal hooks. ●...
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Secure Fan Connector 2. Align the fan connector with the designated notch, then slide the connector to the left to lock the plastic buckle onto the metal part, securing the connection. Install Fan Assembly into Chassis 3. Push the fan assembly into the chassis until it locks into place. Ensure the fan module hooks into the chassis’...
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Power Supply Unit The server system supports two power supplies that can be easily inserted and removed from the rear side of the system without the need for tools. Important ⚠ Both power supplies must be identical and both power cords should be connected. ●...
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Slide Rail & Rack Attaching the Slide Rails to a Rack 1. While pressing the release tab, firmly insert the slide rail's studs into the rack's mounting holes. 2. Release the tab and listen for a “click” to confirm secure attachment. Follow the above procedures in reverse to detach the slide rail from a rack.
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Installing the chassis into a Rack 1. With at least two people, carefully lift the chassis and align the chassis with the L-shaped shelf on the rails. 2. Slowly slide the chassis into place, ensuring even alignment on both sides. 3.
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